Skip to main content
Dataset Overview | National Centers for Environmental Information (NCEI)

National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected during stratified random surveys (StRS) of the Hawaiian Archipelago

browse graphicPreview graphic
The benthic cover data in this collection result from the analysis of images produced by benthic photo-quadrat surveys. These surveys were conducted along transects at stratified random sites across the Hawaiian Archipelago as a part of the ongoing National Coral Reef Monitoring Program (NCRMP). Benthic cover data and the associated images are both included in this collection.

A stratified random sampling (StRS) design was employed to survey the coral reef ecosystems throughout the region. The survey domain encompassed the majority of the mapped area of reef and hard bottom habitats in the 0-30 m depth range. The stratification scheme included island, reef zone, and depth in all regions, as well as habitat structure type in the Main Hawaiian Islands. Sampling effort was allocated based on strata area and sites were randomly assigned within strata. Sites were surveyed using photo-quadrats along transects. The imagery were then analyzed to produce estimates of relative abundance (percent cover), frequency of occurrence, benthic community taxonomic composition, and relative generic richness.

Benthic habitat imagery were quantitatively analyzed using Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software from 2010 to 2014 and a web-based annotation tool called CoralNet (Beijbom et al. 2015) starting in 2015. In general, images were analyzed to produce three functional group levels of benthic cover: Tier 1 (e.g., hard coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Hard Coral = massive, branching, foliose, encrusting, etc.; Macroalgae = upright macroalgae, encrusting macroalgae, bluegreen macroalgae, and Halimeda, etc.), and Tier 3 (e.g., Hard Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.).
  • Cite as: NOAA Pacific Islands Fisheries Science Center, Ecosystem Sciences Division (2018). National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected during stratified random surveys (StRS) of the Hawaiian Archipelago. [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.7289/v5js9nr4. Accessed [date].
gov.noaa.nodc:NCRMP-StRS-Images-HI
Search Data
  • Granule Search (search)
    Search for data granules belonging to this collection (a granule is the smallest aggregation of data that can be independently described and retrieved).
Download Data
  • CRCP Benthic Cover Hawaii (download)
    ERDDAP acts as a middleman between you and various remote data servers. ERDDAP offers an easy-to-use, consistent way to request data: via the OPeNDAP standard. Many datasets can also be accessed via ERDDAP's Web Map Service (WMS). ERDDAP returns data in the common file format of your choice. ERDDAP offers all data as .html table, ESRI .asc and .csv, Google Earth .kml, OPeNDAP binary, .mat, .nc, ODV .txt, .csv, .tsv, .json, and .xhtml.
Distribution Formats
  • CSV
  • JPG
Ordering Instructions Contact NCEI for other distribution options and instructions.
Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2013-08-02 to Present
Spatial Bounding Box Coordinates
West: -178.384
East: -154.807
South: 18.9192
North: 28.458
Spatial Coverage Map
General Documentation
Associated Resources
  • Coral Reef Conservation Program (2016). Documentation for NOAA's Coral Reef Conservation Program (CRCP) National Coral Reef Monitoring Program (NCRMP) data archived at NCEI (NCEI Accession 0157633). NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0157633.
  • Pacific Islands Fisheries Science Center, 2020: National Coral Reef Monitoring Program: Benthic Images Collected from Stratified Random Sites (StRS) across the Hawaiian Archipelago from 2013 to 2019, https://www.fisheries.noaa.gov/inport/item/36152.
  • Pacific Islands Fisheries Science Center, 2020: National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected during Stratified Random Surveys (StRS) across the Hawaiian Archipelago from 2013 to 2019, https://www.fisheries.noaa.gov/inport/item/36155.
  • Towards Automated Annotation of Benthic Survey Images: Variability of Human Experts and Operational Modes of Automation
  • Kohler, K. E., & Gill, S. M. (2006). Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology. Computers & Geosciences, 32(9), 1259–1269. https://doi.org/10.1016/j.cageo.2005.11.009
    • https://doi.org/10.1016/j.cageo.2005.11.009
      Kohler, K.E. and S.M. Gill, 2006. Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology. Computers and Geosciences, Vol. 32, No. 9, pp. 1259-1269, https://doi.org/10.1016/j.cageo.2005.11.009.
Publication Dates
  • publication: 2018-03-07
  • revision: 2023-02-17
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Ongoing - data is continually being updated
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Accessions 0159144, 0164293, 0164295, 0159140, 0211063, 0217940, 0268773, 0276273
Purpose The NOAA National Coral Reef Monitoring Program (NCRMP) details a long term approach to provide an ecosystem perspective via monitoring climate, fish, benthic, and socioeconomic variables in a consistent and integrated manner. The NCRMP is intended to coordinate various NOAA Coral Reef Conservation Program (CRCP) biological, physical, and human dimensions activities into a cohesive NOAA-wide effort. Through the implementation of the NCRMP, NOAA will be able to clearly and concisely communicate results of national-scale monitoring to national, state, and territorial policy makers, resource managers, and the public on a periodic basis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: NOAA Pacific Islands Fisheries Science Center, Ecosystem Sciences Division (2018). National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected during stratified random surveys (StRS) of the Hawaiian Archipelago. [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.7289/v5js9nr4. Accessed [date].
Cited Authors
Principal Investigators
Collaborators
Contributors
Resource Providers
Publishers
Acknowledgments
  • Related Funding Agency: NOAA Coral Reef Conservation Program
Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
CoRIS Discovery Thesaurus
  • Numeric Data Sets > Benthic
  • Visual Images > Habitats
CoRIS Theme Thesaurus
  • EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat
  • EARTH SCIENCE > Biosphere > Aquatic Habitat > Reef Habitat
  • EARTH SCIENCE > Biosphere > Microbiota > Blue-green Algae
  • EARTH SCIENCE > Biosphere > Vegetation > Algae > Algal Cover
  • EARTH SCIENCE > Biosphere > Vegetation > Algae > Crustose Coralline Algae
  • EARTH SCIENCE > Biosphere > Vegetation > Algae > Encrusting Macroalgae
  • EARTH SCIENCE > Biosphere > Vegetation > Algae > Turf Algae
  • EARTH SCIENCE > Biosphere > Zoology > Corals
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Baseline studies
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Quadrat Monitoring
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Quadrat Monitoring > Photograph Analysis
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect Monitoring
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect Monitoring > Belt Transect
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > In Situ Biological
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Photographic Analysis
  • EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Rapid Assessment Studies
  • EARTH SCIENCE > Biosphere > Zoology > Mollusks > Tridacna
  • EARTH SCIENCE > Biosphere > Zoology > Sponges
  • EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs
  • EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology
  • EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Benthic biology
  • EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Coral Cover
  • EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Hard Coral Cover
  • EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Hard Coral Cover Live percentage
  • EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > OctoCoral Cover
  • EARTH SCIENCE > Oceans > Marine Biology > Coral
  • EARTH SCIENCE > Oceans > Marine Biology > Coral Communities
  • EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates
  • EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates > Macroinvertebrates
  • EARTH SCIENCE > Oceans > Marine Biology > Marine Plants > Seagrass
Global Change Master Directory (GCMD) Science Keywords Provider Keywords
  • PHOTOQUADRAT IMAGES (Measured)
  • REA
  • Rapid Ecological Assessment
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Contributing Data Centers
  • CRED
  • CREP
  • Coral Reef Ecosystem Division
  • Coral Reef Ecosystem Program
  • ESD
  • Ecosystem Sciences Division
  • PIFSC
  • Pacific Islands Fisheries Science Center
Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords NODC PLATFORM NAMES THESAURUS Global Change Master Directory (GCMD) Platform Keywords ICES/SeaDataNet Ship Codes
Instrument keywords NODC INSTRUMENT TYPES THESAURUS Global Change Master Directory (GCMD) Instrument Keywords
Place keywords NODC SEA AREA NAMES THESAURUS CoRIS Place Thesaurus
  • COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Hawaii (21N160W0000)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Hawaii Island (19N155W0003)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Kauai Island (22N159W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Hawaii > Molokai Island (21N157W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > French Frigate Shoals (24N166W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Kure Atoll (28N178W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Laysan Island (25N171W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Lisianski Island (25N173W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Maro Reef (25N170W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Midway Atoll (28N177W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Northwestern Hawaiian Islands (28N178W0000)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Oahu (21N157W0003)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Honolulu > Pearl and Hermes Reef (27N176W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Kalawao > Kahoolawe Island (20N156W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Kauai > Niihau Island (21N160W0001)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Maui > Lanai Island (20N156W0002)
  • COUNTRY/TERRITORY > United States of America > Hawaii > Maui > Maui Island (20N156W0004)
  • COUNTRY/TERRITORY > United States of America > Hawaiian Islands (21N157W0027)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands (21N157W0027)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Hawaii > Hawaii (21N160W0000)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Hawaii Island > Hawaii Island (19N155W0003)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Kahoolawe Island > Kahoolawe Island (20N156W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Kauai Island > Kauai Island (22N159W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Lanai Island > Lanai Island (20N156W0002)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Maui Island > Maui Island (20N156W0004)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Molokai Island > Molokai Island (21N157W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Niihau Island > Niihau Island (21N160W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Hawaiian Islands > Oahu Island > Oahu (21N157W0003)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands (28N178W0000)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > French Frigate Shoals (24N166W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Kure Atoll (28N178W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Laysan Island (25N171W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Lisianski Island (25N173W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Maro Reef (25N170W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Midway Atoll (28N177W0001)
  • OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Northwestern Hawaiian Islands > Pearl and Hermes Reef (27N176W0001)
Global Change Master Directory (GCMD) Location Keywords Provider Place Names
  • MHI
  • Main Hawaiian Islands
  • NWHI
  • Northwestern Hawaiian Islands
Project keywords NODC PROJECT NAMES THESAURUS CRCP Project
  • 743
  • National Coral Reef Monitoring Program
  • National Coral Reef Monitoring Program (NCRMP)
Provider Project Names
  • Coral Reef Conservation Program (CRCP)
  • National Coral Reef Monitoring Program (NCRMP)
  • Pacific Reef and Assessment Monitoring Program (Pacific RAMP - NOAA/NMFS/CRED)
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: NOAA Pacific Islands Fisheries Science Center, Ecosystem Sciences Division (2018). National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected during stratified random surveys (StRS) of the Hawaiian Archipelago. [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.7289/v5js9nr4. Accessed [date].
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees
  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: series
Processing Steps
  • 2017-02-07T16:39:11Z - NCEI Accession 0159140 v1.1 was published.
  • 2017-02-10T15:14:06Z - NCEI Accession 0159144 v1.1 was published.
  • 2017-02-10T15:15:19Z - NCEI Accession 0159140 was revised and v2.2 was published.
  • 2017-08-31T04:34:47Z - NCEI Accession 0164293 v1.1 was published.
  • 2017-08-31T04:45:20Z - NCEI Accession 0164295 v1.1 was published.
  • 2020-07-10T04:41:00Z - NCEI Accession 0211063 v1.1 was published.
  • 2020-08-27T14:45:43Z - NCEI Accession 0217940 v1.1 was published.
  • 2022-11-11T19:35:16Z - NCEI Accession 0268773 v1.1 was published.
  • 2023-02-17T16:58:30Z - NCEI Accession 0276273 v1.1 was published.
Acquisition Information (collection)
Instrument
  • camera
  • laboratory analysis
  • photograph
  • visual observation
Platform
  • NOAA Ship Hi'ialakai
  • NOAA Ship Oscar Elton Sette
Last Modified: 2024-03-14T18:09:09Z
For questions about the information on this page, please email: ncei.info@noaa.gov